| TW | LW | Wks | Title | Artist | Label |
| 1 | 2 | 12 | Breathe | Sixpence None The Richer | Word |
| 2 | 4 | 12 | Until The Sun | Pax 217 | ForeFront |
| 3 | 6 | 11 | This Good Day | Fernando Ortega | Myrrh |
| 4 | 7 | 11 | Beautiful Sound | Newsboys | Sparrow |
| 5 | 8 | 11 | Always Have, Always Will | Avalon | Sparrow |
| 6 | 9 | 11 | Fingerprints Of God | Steven Curtis Chapman | Sparrow |
| 7 | 10 | 10 | Feed The Forgotten Soul | David Kauffman | Ministry Music |
| 8 | 11 | 10 | Blessing In Disguise | Lost Dogs | BEC |
| 9 | 12 | 10 | Through It All | David Robertson | Discovery House |
| 10 | 13 | 10 | Set Your Eyes To Zion | P.O.D. | Atlantic |
| 11 | 14 | 9 | Rest | Skillet | ForeFront |
| 12 | 15 | 9 | All The Way To Heaven | V•enna | Essential |
| 13 | 16 | 9 | Captured | Aaron Benward | Sparrow |
| 14 | 17 | 8 | Pass The Flame | John Elefante | Pamplin |
| 15 | 18 | 8 | Beloved | Tracy Dawn | Atlantic |
| 16 | 19 | 8 | What Good | Third Day | Essential |
| 17 | 20 | 7 | The Name Of Jesus | Christopher Wright | Independent |
| 18 | 21 | 7 | My Refuge | Sonicflood | Gotee |
| 19 | 22 | 7 | When Christ Comes | Darlene Zschech | Integrity |
| 20 | 23 | 6 | God Of Second Chances | Jamie Slocum | Freedom Records |
| 21 | 24 | 6 | Every Voice | Al Denson | Spring Hill |
| 22 | 25 | 6 | Shackles (Praise You) | Mary Mary | Columbia |
| 23 | 26 | 6 | Different Light | Nicol Smith | Curb |
| 24 | 27 | 5 | Second Hand Clothing | Eli | ForeFront |
| 25 | 28 | 5 | If You Want Me To | Ginny Owens | Rocketown Records |
| 26 | 29 | 5 | Breathe In | Petra | Word |
| 27 | 30 | 4 | I Am The Way | Mark Schultz | Myrrh |
| 28 | 31 | 4 | Love Is The Answer | Cindy Morgan | Word |
| 29 | 32 | 4 | I Suspect Myself | Morgan Cryar | Embassy Music |
| 30 | 33 | 4 | Bouncing Off The Ceiling | Ragamuffin Band | Myrrh |
| 31 | 34 | 3 | Feel It All | Margaret Becker | Sparrow |
| 32 | 35 | 3 | Only Fools | Crystal Lewis | Metro One |
| 33 | 36 | 3 | Sure Shot | Supertones | BEC Recordings |
| 34 | 37 | 2 | Living For Heaven | Phillips, Craig, & Dean | Sparrow |
| 35 | 38 | 2 | Written On My Heart | Plus One | Atlantic |
| 36 | 39 | 2 | Freedom | Sierra | Pamplin |
| 37 | 40 | 2 | Where I Began | Caedmon's Call | Essential |
| 38 | NEW | 1 | They'll Know We Are Christians | Carolyn Arends | Reunion |
| 39 | NEW | 1 | Come Quickly Lord | Rebecca St. James | ForeFront |
| 40 | NEW | 1 | I Will Not Forget You | Praise Band | Maranatha Music |