| 1 | 5 | 13 | Let The Praises Ring | Lincoln Brewster | Vertical |
| 2 | 1 | 14 | You Are So Good To Me | Third Day | Essential |
| 3 | 2 | 16 | Falling Down | Bebo Norman | Essential |
| 4 | 4 | 12 | Getting Into You | Relient K | Gotee |
| 5 | 3 | 14 | I Still Believe | Jeremy Camp | BEC |
| 6 | 7 | 11 | New | 40 Days | Provident |
| 7 | 8 | 13 | Pierced | Audio Adrenaline | Forefront |
| 8 | 12 | 12 | Legacy | Nichole Nordeman | Sparrow |
| 9 | 10 | 10 | Neighborhoods | Big Daddy Weave | Fervent |
| 10 | 14 | 8 | The Hand Song | Go Fish | InPop |
| 11 | 13 | 10 | Welcome Home | O.C. Supertones | BEC |
| 12 | 9 | 11 | Day By Day | Point Of Grace | Word |
| 13 | 16 | 9 | Long Before The Sun | Scott Krippayne | Independent |
| 14 | 15 | 11 | Every Moment | Joy Williams | Reunion |
| 15 | 17 | 5 | Somebody's Praying Me Through | Allen Asbury | Independent |
| 16 | 19 | 7 | Word Of God Speak | Mercy Me | INO |
| 17 | 21 | 6 | Step By Step | Michael W. Smith | Reunion |
| 18 | 20 | 8 | Water | Kristy Starling | Word |
| 19 | 18 | 8 | Less Like Scars | Sara Groves | INO |
| 20 | 24 | 6 | Smile (Just Want To Be With You) | Chris Rice | Rocketown |
| 21 | 26 | 5 | How Do I Love Her | Steven Curtis Chapman | Sparrow |
| 22 | 23 | 7 | Give You My Heart | Jeff Deyo | Gotee |
| 23 | 25 | 7 | Overwhelm Me | Steve Garrett | Independent |
| 24 | 28 | 5 | I Cannot Hide From You | Greg Long | Discovery House Music |
| 25 | 27 | 6 | Be Near | Shane & Shane | Inpop |
| 26 | 31 | 4 | Weight Of The World | Glassbyrd | Word |
| 27 | 30 | 6 | I Left Everything To Follow You | Michael Card | Community |
| 28 | 33 | 4 | Hallelujah(Your Love Is Amazing) | Philips, Craig & Dean | Sparrow |
| 29 | 36 | 2 | Clear The Stage | Ross King | Independent |
| 30 | 32 | 5 | Acceptable | Charmaine | Inpop |
| 31 | 37 | 2 | Everything | Seven Places | BEC |
| 32 | 34 | 6 | Freedom | Michael English | Curb |
| 33 | 35 | 4 | Never Heard The Music | Rich Mullins | Reunion |
| 34 | 38 | 2 | I Know | Seventh Day Slumber | Crowne |
| 35 | NEW | 1 | Gone | Switchfoot | Sparrow |
| 36 | NEW | 1 | My Heart Goes Out | Warren Barfield | Creative Trust |
| 37 | 40 | 2 | Moses In The Desert | Lost Dogs | BEC |
| 38 | 39 | 4 | Friday Night | Unsearchable Riches | Independent |
| 39 | NEW | 1 | Waiting On The Sun | Sixpence None The Richer | Word |
| 40 | NEW | 1 | Live To Worship | Scott Krippayne | Spring Hill |