| TW | LW | Wks | Title | Artist | Label |
| 1 | 4 | 8 | Mission 3:16 | Carman | Sparrow |
| 2 | 3 | 9 | Thought You'd Be Here | Wes King | Sparrow |
| 3 | 8 | 8 | Won't Stop Love | Newsong | Benson |
| 4 | 10 | 7 | Boomerang | Bruce Carroll | Benson |
| 5 | 7 | 9 | Sold Out Believer | Clay Crosse | Reunion |
| 6 | 12 | 7 | The Whole SheBang | The Electrics | Sarabellum |
| 7 | 13 | 6 | Second Season | Five Iron Frenzy | Sarabellum |
| 8 | 14 | 7 | All the Evidence I Need | 4Him | Benson |
| 9 | 1 | 10 | Somewhere Down the Road | Amy Grant | Myrrh |
| 10 | 5 | 9 | Stand By Me | Rhonda Gunn | Damascus Road |
| 11 | 16 | 7 | What Are We Doing Here | John Cox | Questar |
| 12 | 17 | 6 | In Light of the Grace | Mark Cable | Flying Eagle |
| 13 | 18 | 5 | Butterfly | Seven Day Jesus | ForeFront |
| 14 | 22 | 4 | Hands in the Air | The Waiting | Sparrow |
| 15 | 21 | 5 | Not Just Another Day | John Elefante | Pamplin |
| 16 | 19 | 6 | Say What You Want | Sunday Drive | Brentwood |
| 17 | 20 | 6 | Say I Am | Satellite Soul | ForeFront |
| 18 | 23 | 5 | Threads | Geoff Moore & the Distance | ForeFront |
| 19 | 24 | 5 | This World | Caedmon's Call | Warner Alliance |
| 20 | 25 | 4 | Watch My Back | Keaggy, King & Denté | Sparrow |
| 21 | 26 | 5 | Heal Me | Aaron„Jeoffrey | StarSong |
| 22 | 27 | 4 | Jesus Saves | Greg Long | Myrrh |
| 23 | 28 | 4 | Fare Thee Well | PFR | Sparrow |
| 24 | 29 | 4 | Closer Still | Wilshire | Rocketown |
| 25 | 30 | 3 | Five Candles (You Were There) | Jars of Clay | Essential |
| 26 | 31 | 3 | Angels | All Star United | Reunion |
| 27 | 32 | 3 | All Glory to God | Kathy Troccoli | Reunion |
| 28 | 33 | 3 | What A Privilege | Cheri Keaggy | Sparrow |
| 29 | 34 | 3 | Let It Be Love | Say So | Organic |
| 30 | 39 | 2 | Eyes of God | Common Children | Tattoo Records |
| 31 | 36 | 3 | Testify | Avalon | Sparrow |
| 32 | 37 | 2 | Constant | Out of the Grey | Sparrow |
| 33 | 38 | 2 | Without Love | Rhapsody | Rhapsody Music |
| 34 | 35 | 3 | Fall On Me | Whiteheart | Curb |
| 35 | 40 | 2 | I Will Not Go Quietly | Steven Curtis Chapman | Sparrow |
| 36 | NEW | 1 | Take Me As I Am | FFH | Independent |
| 37 | NEW | 1 | Not the Same | Crystal Lewis | Myrrh |
| 38 | NEW | 1 | God, Inc. | Rick Elias | Pamplin |
| 39 | NEW | 1 | The Unveiling | Michael Card | Covenant Artists |
| 40 | NEW | 1 | What Does It Take | Guardian | Myrrh |