| TW | LW | Wks | Title | Artist | Label |
| 1 | 1 | 9 | Pray | Rebecca St. James | ForeFront |
| 2 | 6 | 9 | Brighten My Heart | Sixpence None the Richer | Rocketown |
| 3 | 7 | 8 | Out of the Wilderness | Danny Chambers | Hosanna Integrity |
| 4 | 8 | 8 | Carry Us Through | Sarah Masen | re:think |
| 5 | 14 | 8 | Basic Instructions | Burlap to Cashmere | Squint |
| 6 | 15 | 8 | Lord of Eternity | Fernando Ortega | Myrrh |
| 7 | 13 | 9 | Strollin' on the Water | Bryan Duncan | Myrrh |
| 8 | 18 | 7 | My Friend (So Long) | DC Talk | ForeFront |
| 9 | 2 | 10 | Nothing Is Beyond You | Amy Grant & the Ragamuffins | Myrrh |
| 10 | 17 | 6 | Missing Person | Michael W. Smith | Reunion |
| 11 | 16 | 8 | Be With Him | Crystal Lewis | Word |
| 12 | 4 | 11 | Before the River Came | 4Him | Benson |
| 13 | 5 | 10 | It Must Have Been Your Hands | Clay Crosse | Reunion |
| 14 | 9 | 12 | More Faithful | Skillet | ForeFront |
| 15 | 11 | 9 | Ready to Ride | Clear | Ardent |
| 16 | 19 | 7 | Saving Grace | Point of Grace | Word |
| 17 | 20 | 7 | Paradise | The Insyderz | KMG |
| 18 | 21 | 6 | Moses | The W's | Five Minute Walk |
| 19 | 22 | 6 | I Will Arise | Michael Card | Myrrh |
| 20 | 24 | 5 | Psalm Twenty-Three | Kathy Troccoli | Reunion |
| 21 | 23 | 6 | Lovely Mausoleum | Big Tent Revival | Forefront |
| 22 | 25 | 5 | Hold Me Now | Jenifer Knapp | Gotee |
| 23 | 26 | 5 | I Need You | Jeni Varnadeau | Pamplin |
| 24 | 29 | 4 | One of These Days | FFH | essential |
| 25 | 28 | 5 | After the Rain | Mancy Allan Kane | PMG |
| 26 | 27 | 5 | Justified | According to John | KMG |
| 27 | 30 | 4 | Fly Away | Take 6 | Time Warner |
| 28 | 31 | 4 | Forgive | The Normals | ForeFront |
| 29 | 33 | 3 | Reason Enough | Avalon | Sparrow |
| 30 | 32 | 4 | Only You | Christian Stevens | Smart Records |
| 31 | 34 | 3 | Gloria | Watermark | Rocketown |
| 32 | 35 | 3 | Tell Me | Temple Yard | Gotee |
| 33 | 36 | 2 | Walk By Faith | Out of the Grey | Sparrow |
| 34 | 37 | 2 | Higher Faith | Rhonda Gunn | Damascus Road |
| 35 | 38 | 2 | Freedom of the Sky | Phillips, Craig and Dean | Star Song |
| 36 | 39 | 2 | Christ of Hope | Michelle Tumes | Sparrow |
| 37 | 49 | 2 | Carried Away | Between Thieves | Benson |
| 38 | NEW | 1 | A Sign Came Through A Window | Phil Keaggy | Sparrow |
| 39 | NEW | 1 | Father's Love | Bob Carlisle | DMG |
| 40 | NEW | 1 | Every Word You Say | Erin O'Donell | Cadence |